Utility of multiplex reverse transcriptase-polymerase chain reaction for diagnosis and serotypic characterization of dengue and chikungunya viruses in clinical samples
Autor(es)Mishra Baijayantimala, Sharma Mirnalini, Pujhari Sujit Kumar, Ratho Radha Kanta, Gopal Dvr Sai, Kumar Cvm Naresh, Sarangi Gita, Chayani Nirupama, Varma Subhash C
ResumoThe reemergence of chikungunya virus (CHIKV) has compounded the already existing dengue problem because of clinical similarities - common vector, dem-ing the need for a rapid - specific diagnosis. Thus, dengue chikungunya multiplex reverse transcriptase-polymerase chain reaction (DCmRT-PCR) was developed - validated for simultaneous detection of dengue - chikungunya viral infections - its utility in virus serotyping. Blood samples from 97 suspected dengue - chikungunya cases - 10 healthy controls were subjected to dengue - chikungunya conventional RT-PCR - DCmRT-PCR. Thirty-one of 97 samples were positive for dengue or chikungunya viral RNA by RT-PCR - DCmRT-PCR with 100% concordance. DCmRT-PCR products were cycle sequenced. Seven dengue virus strains were clustered within genotype III of DENV-3 - 4 within genotype III of DENV-1, whereas chikungunya sequences were clustered within the Central/East African genotype. DCmRT-PCR was found to be a potential rapid test for simultaneous detection of dengue - CHIKV in clinical samples along with dengue serotyping.
Palavras-ChaveMultiplex RT-PCR; Dengue; Chikungunya; Diagnosis; Serotyping
ImprentaDiagnostic Microbiology and Infectious Disease, v. 71, n. 2, p. 118-125, 2011
Identificador do Objeto Digital10.1016/j.diagmicrobio.2011.06.020
DescritoresChikungunya virus - Cell ; Chikungunya virus - Flaviviridae ; Chikungunya virus - Pathogenesis ; Chikungunya virus - RNA ; Chikungunya virus - Viral infections ; Chikungunya virus - PCR detection ; Chikungunya virus - RT-PCR ; Chikungunya Virus - Virus ; Chikungunya virus - Chikungunya fever ; Chikungunya virus - Dengue ; Chikungunya virus - Public health
Data de Publicação:2011