Retrospective screening of acute undifferentiated fever serum samples with universal flavivirus primers

Autor(es): Khongwichit, Sarawut; Libsittikul, Sirikwan; Yoksan, Sutee; Auewarakul, Prasert; Suputtamongkol, Yupin; Smith, Duncan R.


Resumo: Introduction: Fever is a common symptom of many tropical diseases and in many cases the etiologic agent remains unidentified as a consequence of either the etiologic agent not being part of routine diagnostic screening or as a consequence of false negatives on standard diagnostic tests.Methodology: This study screened a well characterized panel of 274 serum samples collected on day of admission from adult patients with acute undifferentiated fever admitted to a hospital in Nakhon Ratchasima, Thailand by RT-PCR using pan-flavivirus degenerate primers.Results: Subsequent clinical diagnosis was achieved for 38 of the patients, and included 19 cases of dengue fever. RT-PCR screening identified seven positive samples (2.5%) which were revealed by sequence analysis to be dengue virus 1 (2 cases), dengue virus 2 (2 cases) and dengue virus 3 (3 cases). Only 5 out of 19 (26%) serum samples from patients subsequently diagnosed with dengue were positive, but 2 samples which clinically remained undiagnosed were shown to be positive for dengue virus. Sequence analysis suggested that the dengue virus 3 cases occurred as a result of importation of a strain of dengue from India or China. No other flaviviruses were identified.Conclusions: No evidence was found of other flaviviruses besides dengue circulating in this population. Despite improved diagnostic tests, cases of dengue are still evading correct diagnosis.


Palavras-Chave: Fever; Dengue; Serum; Flavivirus; Phylogeny; RT-PCR; Zika Virus - Infection; Dengue infections; Thailand; Transmission; Encephalitis


Imprenta: Journal of Infection In Developing Countries, v. 9, n. 7, p. 760-764, 2015


Descritores: Zika virus - RT-PCR ; Zika virus - Dengue ; Zika virus - Zika fever


Data de publicação: 2015